CDS

Accession Number TCMCG007C53588
gbkey CDS
Protein Id XP_018510645.1
Location complement(join(10297064..10297204,10297297..10297364,10297478..10297613,10297709..10298155,10298260..10298372,10298454..10298514,10298608..10298667,10298742..10298789,10298887..10298966,10299195..10299198))
Gene LOC103838474
GeneID 103838474
Organism Brassica rapa

Protein

Length 385aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018655129.2
Definition splicing factor U2af large subunit B isoform X5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description U2 snRNP auxiliary factor large subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12837        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGGCCAGGTTCCTAGTGTGCCAGCTACTCCTAATATTCCTGGGATGTTCCCCAACGTGCTCGCAATGGTCCCTAATCAGCAACTGGGAGCGCTTCCTTTATTGCCATTTCAGGCAATGACTCAGCAGGCAACTAGGCATGCTAGACGAGTCTATGTTGGTGGCCTTCCACCCACTGCAAATGAACAGTCCATTGCAACTTTCTTTAGCCAAGTGATGTCAGCGGTTGGGGGAAACACTGCTGGGCCAGGCGATGCGGTGGTGAATGTTTATATAAACCATGAAAAGAAGTTCGCCTTTGTGGAGATGAGATCTGTTGAGGAGGCTAGTAATGCAATGGCATTAGACGGAATTATATTAGAGGGGGTTCCTGTAAAGGTGAAGAGGCCTACTGACTATAATCCATCCCTTGCTGCAGCTCTTGGTCCGAGCCAGCCTAATCCCAATCTCAACTTGGCGGCTGTTGGAGTTTCCTCGGGGTCTACTGGTGGGCTTGAGGGTCCGGACCGCTTATTTGTGGGTGGGATTCCTTATTACTTGACAGAGGATCAGATCAGGGAGCTCTTGGAGTCCTTTGGGCCGCTAAAAGGTTTCAACTTGGTTAAAGACAGGGAAACTGGAAACTCGATGGGATATGCATTCTGTGTATTCCAGGATCCTTCAGTCACAGATATTGCATGTGCTGCTCTAAACGGGATTAAGATGGGCAATAAGACACTTACAGTGAGGCGTGCAGTCCAAGGTGCGATTCAACCTAAGCCTGAGCAAGAAGATATATTACTTCATGCTCAACAGCAGATTGCTTTGCAGAGGCTTATGCTACAGCCAGGAGGCACGCCCACCAAGATTGTATGTTTGACTCAAGTGGTTACAGCTAATGTTCTTGGGGACGATAAAGAATATGAAGACATAATGGAGGACATGAGACTGGAAGGTGGAAAATTCGGTAACTTGGTGAATGTTGTGATTCCGAGGCCCAGTCCTGATCATGATCCAACACCAGGAGTTGGGAAGGTTTTCTTAGAGTATGCGGATTTGGACAGCGCAGCAAAGGCAAGATCCAGGATGAATGGAAGAAAGTTTGATGGAATCCAAGTGGTAGCTGTGTATTACCCCGAAAACAAGTATGCACAAGGCGACTACGAAGCCTGCTGA
Protein:  
MAGQVPSVPATPNIPGMFPNVLAMVPNQQLGALPLLPFQAMTQQATRHARRVYVGGLPPTANEQSIATFFSQVMSAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVKRPTDYNPSLAAALGPSQPNPNLNLAAVGVSSGSTGGLEGPDRLFVGGIPYYLTEDQIRELLESFGPLKGFNLVKDRETGNSMGYAFCVFQDPSVTDIACAALNGIKMGNKTLTVRRAVQGAIQPKPEQEDILLHAQQQIALQRLMLQPGGTPTKIVCLTQVVTANVLGDDKEYEDIMEDMRLEGGKFGNLVNVVIPRPSPDHDPTPGVGKVFLEYADLDSAAKARSRMNGRKFDGIQVVAVYYPENKYAQGDYEAC